Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs80249833 | chr9:106725249 | G/A | 1.28E-8 | 210 | 16.53 | 12.63 | 10.55 | KM Plot |
KIRP | rs80264941 | chr14:59857852 | T/C | 0.00024 | 209 | 14.68 | 19.4 | 6.63 | KM Plot |
KIRP | rs80272009 | chr11:34827243 | T/A | 0 | 213 | 15.2 | 17 | 3.83 | KM Plot |
KIRP | rs80273102 | chr11:34773121 | G/C | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
KIRP | rs80335689 | chr11:34820455 | A/G | 0 | 212 | 15.33 | 17 | 3.83 | KM Plot |
KIRP | rs8039887 | chr15:27030000 | G/T | 0.000141 | 213 | 10.83 | 19.83 | 15.1 | KM Plot |
KIRP | rs8043754 | chr16:77150162 | G/C | 0.000525 | 214 | 17.92 | 13.67 | 17.08 | KM Plot |
KIRP | rs8044698 | chr16:4577069 | A/G | 2.52E-6 | 214 | 10.83 | 6.9 | 16.73 | KM Plot |
KIRP | rs8045848 | chr16:74609177 | A/C | 0.000401 | 214 | 15.12 | 19.83 | 14.53 | KM Plot |
KIRP | rs8046175 | chr16:47741196 | A/G | 7.92E-8 | 214 | 17.2 | 12.9 | 10.83 | KM Plot |
KIRP | rs8052732 | chr16:48182878 | G/A | 0.00016 | 205 | 17.13 | 14.83 | 10.83 | KM Plot |
KIRP | rs8054017 | chr16:47715512 | T/C | 2.14E-6 | 214 | 17.17 | 13.17 | 9 | KM Plot |
KIRP | rs8057858 | chr16:4531814 | G/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs8058798 | chr16:4531659 | C/G | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs8062269 | chr16:47767256 | G/C | 3.7E-9 | 213 | 17.2 | 13.17 | 10.83 | KM Plot |